STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_2106KEGG: spe:Spro_0887 putative lipoprotein. (132 aa)    
Predicted Functional Partners:
Sdel_2109
KEGG: dar:Daro_2373 acyl carrier protein.
 
     0.821
Sdel_2124
KEGG: pca:Pcar_2651 acyl-carrier protein.
 
     0.745
Sdel_2104
KEGG: hhe:HH0539 hypothetical protein.
 
     0.740
Sdel_2099
PFAM: lipid A biosynthesis acyltransferase; KEGG: saz:Sama_3384 glycosyl transferase, group 2 family protein.
 
     0.739
Sdel_2098
PFAM: glycosyl transferase family 2; KEGG: ppd:Ppro_0921 glycosyl transferase family protein.
 
     0.710
Sdel_2110
PFAM: Beta-ketoacyl synthase; KEGG: dar:Daro_2374 beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.599
Sdel_2105
KEGG: fph:Fphi_1084 aconitate hydratase.
 
     0.569
Sdel_2111
KEGG: aap:NT05HA_1744 hypothetical protein.
       0.528
Sdel_2108
PFAM: ABC-2 type transporter; KEGG: dar:Daro_2372 hypothetical protein.
  
    0.524
Sdel_2107
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_2371 ABC transporter related.
       0.521
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.