STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_2221PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: hch:HCH_02385 SAM-dependent methyltransferase. (314 aa)    
Predicted Functional Partners:
Sdel_2224
PFAM: Radical SAM domain protein; KEGG: lip:LIB011 molybdenum cofactor biosynthesis protein.
 
   
 0.857
Sdel_2215
PFAM: O-methyltransferase family 3; KEGG: wsu:WS2183 hypothetical protein.
 
   
 0.844
Sdel_2216
TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; KEGG: tdn:Suden_0186 asparagine synthase, glutamine- hydrolyzing.
 
  
 0.834
Sdel_2220
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cvi:CV_3952 hypothetical protein.
 
 
 
 0.823
Sdel_2225
PFAM: Radical SAM domain protein; KEGG: pca:Pcar_2884 Fe-S oxidoreductase.
 
   
 0.805
Sdel_2218
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gsu:GSU0630 hypothetical protein.
 
    
0.787
Sdel_2219
TIGRFAM: methyltransferase FkbM family; KEGG: geo:Geob_0653 methyltransferase FkbM family.
     
 0.781
Sdel_2228
PFAM: protein of unknown function DUF115; KEGG: hps:HPSH_00575 hypothetical protein.
   
   0.777
Sdel_2222
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: acp:A2cp1_4443 dTDP-glucose 4,6-dehydratase.
       0.775
Sdel_2217
PFAM: glycosyl transferase group 1; KEGG: tdn:Suden_0191 glycosyl transferase, group 1.
     
 0.774
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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