STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0007Superoxide reductase; PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: gsu:GSU0720 desulfoferrodoxin ferrous iron- binding domain-containing protein. (130 aa)    
Predicted Functional Partners:
Taci_1580
Ferroxidase; Iron-storage protein.
  
  
 0.836
Taci_1125
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: gur:Gura_0869 rubredoxin-type Fe(Cys)4 protein.
  
  
 0.805
Taci_0286
PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: cha:CHAB381_0232 flavodoxin.
 
  
 0.693
Taci_1679
PFAM: beta-lactamase domain protein; KEGG: azo:azo3526 flavoprotein.
 
  
 0.622
Taci_0006
PFAM: 2-nitropropane dioxygenase NPD; KEGG: glo:Glov_0358 2-nitropropane dioxygenase NPD.
       0.559
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
   
    0.435
Taci_0102
PFAM: Rubrerythrin; KEGG: dde:Dde_1320 rubrerythrin, putative.
  
  
 0.432
Taci_0008
PFAM: extracellular solute-binding protein family 5; KEGG: rsp:RSP_3255 ABC peptide transporter, periplasmic binding protein.
       0.411
Taci_1552
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: NAD(FAD)-dependent dehydrogenase.
  
  
 0.401
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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