STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0009PFAM: extracellular solute-binding protein family 5; KEGG: rsp:RSP_3255 ABC peptide transporter, periplasmic binding protein. (544 aa)    
Predicted Functional Partners:
Taci_0010
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0029 oligopeptide ABC transporter (permease).
 0.999
Taci_0011
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU11400 oligopeptide ABC transporter (permease).
 0.999
Taci_0012
KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.995
Taci_0008
PFAM: extracellular solute-binding protein family 5; KEGG: rsp:RSP_3255 ABC peptide transporter, periplasmic binding protein.
 
  
 
0.941
Taci_0013
KEGG: bja:bll2869 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.933
Taci_1436
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sus:Acid_6996 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
    0.783
Taci_0574
KEGG: gbe:GbCGDNIH1_0877 Gln/Arg/Lys/His-binding protein and permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: extracellular solute-binding protein family 3; binding-protein-dependent transport systems inner membrane component; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
  
 
 0.570
Taci_0614
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: ppd:Ppro_0549 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
    0.514
Taci_0209
Methyl-accepting chemotaxis sensory transducer; KEGG: dac:Daci_2408 phosphonate ABC transporter, periplasmic phosphonate-binding protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer.
   
 
 0.409
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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