STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0012KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (328 aa)    
Predicted Functional Partners:
Taci_0010
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0029 oligopeptide ABC transporter (permease).
 0.999
Taci_0011
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU11400 oligopeptide ABC transporter (permease).
 
 0.999
Taci_0013
KEGG: bja:bll2869 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
   
0.957
Taci_0009
PFAM: extracellular solute-binding protein family 5; KEGG: rsp:RSP_3255 ABC peptide transporter, periplasmic binding protein.
  
 0.944
Taci_0008
PFAM: extracellular solute-binding protein family 5; KEGG: rsp:RSP_3255 ABC peptide transporter, periplasmic binding protein.
  
 0.917
Taci_1601
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afw:Anae109_1572 molybdate ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
   
0.906
Taci_1648
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0232 ATPase.
 
    
0.904
Taci_0684
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvm:DvMF_1163 ABC transporter related.
     
0.814
Taci_0527
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_3466 ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit.
 
     
0.727
Taci_1425
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_0356 ABC transporter related.
 
 
   
0.655
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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