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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0073PFAM: microcompartments protein; KEGG: rpc:RPC_1168 microcompartments protein. (175 aa)    
Predicted Functional Partners:
Taci_0079
PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: dde:Dde_3273 ethanolamine utilization protein EutN.
 
 
 0.986
Taci_0077
TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: dds:Ddes_1363 ethanolamine utilization protein EutJ family protein.
 
  
 0.858
Taci_0074
TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: Aldehyde Dehydrogenase; KEGG: kpe:KPK_4880 acetaldehyde dehydrogenase (acetylating).
  
  
 0.805
Taci_0085
PFAM: microcompartments protein; KEGG: dde:Dde_3265 putative propanediol utilization protein PduT.
 
     0.791
Taci_0076
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.748
Taci_0072
PFAM: microcompartments protein; KEGG: maq:Maqu_1242 microcompartments protein.
  
  
 0.746
eutC
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: stm:STM2457 ethanolamine ammonia-lyase small subunit; Belongs to the EutC family.
  
  
 0.669
Taci_0087
PFAM: microcompartments protein; KEGG: maq:Maqu_1227 microcompartments protein.
 
  
 0.648
Taci_0075
PFAM: microcompartments protein; KEGG: dde:Dde_3270 ethanolamine utilization protein EutM precursor.
 
    
0.642
Taci_0070
PFAM: Ethanolamine ammonia lyase large subunit; KEGG: kpn:KPN_02784 ethanolamine ammonia-lyase, heavy chain.
  
  
 0.637
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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