STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0107PFAM: FeoA family protein; iron dependent repressor; SMART: iron dependent repressor; KEGG: dal:Dalk_2732 iron (metal) dependent repressor, DtxR family. (218 aa)    
Predicted Functional Partners:
Taci_0110
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
  
 0.875
Taci_0184
PFAM: nucleoside recognition domain protein; KEGG: bha:BH3588 hypothetical protein.
  
  
 0.717
Taci_0185
PFAM: nucleoside recognition domain protein; KEGG: bsu:BSU34980 hypothetical protein.
  
  
 0.717
Taci_0529
TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Miro domain protein; Ferrous iron transport B domain protein; KEGG: gme:Gmet_2444 ferrous iron transport protein B.
  
  
 0.717
Taci_1451
KEGG: mgm:Mmc1_2383 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; Hpt domain protein; PAC repeat-containing protein; PAS domain containing protein.
     
 0.658
Taci_1686
PFAM: ABC-3 protein; KEGG: dps:DP3062 Mn/Zn ABC transporter, permease.
  
  
 0.629
Taci_0108
PFAM: FeoA family protein; KEGG: rru:Rru_A2468 hypothetical protein.
       0.625
Taci_0797
PFAM: SufBD protein; KEGG: sat:SYN_02867 ABC transporter system permease involved in Fe-S cluster assembly.
 
   
 0.595
Taci_0056
PFAM: zinc/iron permease; KEGG: dvm:DvMF_1916 zinc/iron permease.
  
  
 0.594
Taci_0796
PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: sat:SYN_03206 ABC transporter ATP-binding protein.
 
   
 0.589
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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