STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0123PFAM: inner-membrane translocator; KEGG: scl:sce4028 ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (367 aa)    
Predicted Functional Partners:
Taci_0121
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_2310 D-ribose transporter ATP binding protein.
 
 
 0.992
Taci_0120
Hypothetical protein.
 
  
 0.899
Taci_0119
Hypothetical protein.
 
  
 0.864
Taci_0122
PFAM: inner-membrane translocator; KEGG: sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.862
Taci_0124
Hypothetical protein.
       0.743
Taci_1459
TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar- specific permease EIIA 1 domain; phosphotransferase system PTS EIIB protein; KEGG: bha:BH0844 PTS system, glucose-specific enzyme II, A component.
   
  
 0.438
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.