STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0185PFAM: nucleoside recognition domain protein; KEGG: bsu:BSU34980 hypothetical protein. (154 aa)    
Predicted Functional Partners:
Taci_0184
PFAM: nucleoside recognition domain protein; KEGG: bha:BH3588 hypothetical protein.
     0.993
Taci_0186
PFAM: metallophosphoesterase; KEGG: glo:Glov_2809 metallophosphoesterase.
       0.773
Taci_0107
PFAM: FeoA family protein; iron dependent repressor; SMART: iron dependent repressor; KEGG: dal:Dalk_2732 iron (metal) dependent repressor, DtxR family.
  
  
 0.664
Taci_0109
PFAM: FeoA family protein; KEGG: rsq:Rsph17025_3854 Fe2+ transport system protein B-like protein.
  
  
 0.523
Taci_0530
PFAM: FeoA family protein; KEGG: ank:AnaeK_3366 FeoA family protein.
  
  
 0.523
Taci_0183
PFAM: protein of unknown function DUF6 transmembrane; KEGG: amc:MADE_00423 predicted permease, DMT superfamily protein.
     
 0.506
Taci_1331
KEGG: bha:BH2453 hypothetical protein.
  
     0.435
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.