STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0192PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: ecc:c3444 xanthine dehydrogenase subunit XdhA. (748 aa)    
Predicted Functional Partners:
Taci_0194
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: dps:DP2532 aerobic-type carbon monoxide dehydrogenase, small subunit.
 
 0.998
Taci_0415
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: smd:Smed_4005 molybdopterin dehydrogenase FAD- binding.
 
 0.993
Taci_0416
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: rce:RC1_1076 carbon monoxide dehydrogenase small chain.
 
 0.992
Taci_0193
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: shl:Shal_0653 molybdopterin dehydrogenase FAD- binding.
 
 0.989
Taci_0433
PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe- 2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; ferredoxin; KEGG: sit:TM1040_2704 molybdopterin dehydrogenase, FAD-binding.
     0.977
ade
KEGG: dde:Dde_0136 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
    
  0.903
Taci_0457
PFAM: phosphoribosyltransferase; KEGG: dde:Dde_1506 xanthine-guanine phosphoribosyltransferase.
    
  0.900
Taci_0564
Ribosylpyrimidine nucleosidase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: sfv:SFV_2237 ribonucleoside hydrolase 2.
     
  0.900
Taci_0847
KEGG: yen:YE0713 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
  0.900
Taci_1022
Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
     
  0.900
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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