Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Taci_0206TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein; KEGG: dol:Dole_0755 NifU domain-containing protein. (150 aa)    
Predicted Functional Partners:
iscS
Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
 
 0.999
Taci_0250
TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: sat:SYN_01071 cysteine desulfurase / selenocysteine lyase.
  
 
 0.989
Taci_0796
PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: sat:SYN_03206 ABC transporter ATP-binding protein.
  
  
 0.932
Taci_0797
PFAM: SufBD protein; KEGG: sat:SYN_02867 ABC transporter system permease involved in Fe-S cluster assembly.
  
  
 0.923
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.897
Taci_0627
PFAM: Heat shock protein 70; KEGG: bcr:BCAH187_A4447 chaperone protein DnaK.
  
 0.897
Taci_0208
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: atc:AGR_C_1499 hypothetical protein.
  
  
 0.885
Taci_0205
PFAM: MOSC domain containing protein; KEGG: gme:Gmet_2094 MOSC.
       0.813
Taci_1589
TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; KEGG: afr:AFE_0680 tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase.
 
  
 0.775
Taci_1070
PFAM: nitrogen-fixing NifU domain protein; KEGG: NIFU2; iron-sulfur cluster assembly protein.
  
 
 0.756
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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