STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iscSCysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. (388 aa)    
Predicted Functional Partners:
Taci_0206
TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein; KEGG: dol:Dole_0755 NifU domain-containing protein.
 
 0.999
Taci_0248
KEGG: pca:Pcar_0821 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
   
 0.990
Taci_1588
PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ppd:Ppro_0890 UBA/ThiF-type NAD/FAD binding protein.
   
 0.990
Taci_0208
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: atc:AGR_C_1499 hypothetical protein.
  
  
 0.951
Taci_1275
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: gur:Gura_1560 rhodanese domain-containing protein.
  
 0.929
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
    
 0.921
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.909
Taci_0251
KEGG: sfu:Sfum_3402 SirA family protein; Belongs to the sulfur carrier protein TusA family.
   
 
 0.907
Taci_0205
PFAM: MOSC domain containing protein; KEGG: gme:Gmet_2094 MOSC.
     
 0.801
Taci_1748
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bha:BH0656 hypothetical protein.
  
  
 0.795
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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