STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0210KEGG: eli:ELI_01925 hypothetical protein. (444 aa)    
Predicted Functional Partners:
Taci_0912
PFAM: NUDIX hydrolase; KEGG: sat:SYN_02072 MutT/NUDIX family protein.
  
     0.641
Taci_0316
Putative diguanylate cyclase; KEGG: hch:HCH_03148 response regulator.
  
     0.570
Taci_0807
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
     0.559
Taci_0666
PFAM: flagellin domain protein; KEGG: psa:PST_1398 flagellar hook-associated protein FlgL.
  
     0.512
Taci_0211
Hypothetical protein.
       0.509
Taci_0374
PFAM: Curli production assembly/transport component CsgG; KEGG: sus:Acid_5438 curli production assembly/transport component CsgG.
  
     0.446
Taci_0183
PFAM: protein of unknown function DUF6 transmembrane; KEGG: amc:MADE_00423 predicted permease, DMT superfamily protein.
  
     0.428
Taci_0496
PFAM: peptidase M16 domain protein; KEGG: saz:Sama_3596 pseudouridine synthase, Rsu; Belongs to the peptidase M16 family.
  
     0.404
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.