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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0220PFAM: GCN5-related N-acetyltransferase; KEGG: bcz:BCZK1679 acetyltransferase. (172 aa)    
Predicted Functional Partners:
Taci_0221
PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: afw:Anae109_3468 DEAD/DEAH box helicase domain-containing protein.
 
     0.799
Taci_0219
PFAM: protein of unknown function DUF342; KEGG: azo:azo1270 hypothetical protein.
       0.693
Taci_1442
TRAP-type C4-dicarboxylate transport system small permease component-like protein; KEGG: sit:TM1040_2068 hypothetical protein.
  
     0.497
Taci_0218
PFAM: ketose-bisphosphate aldolase class-II; KEGG: gbm:Gbem_1007 fructose/tagatose bisphosphate aldolase-like protein.
       0.472
Taci_0035
PFAM: DSBA oxidoreductase; KEGG: rce:RC1_1261 DsbA-like thioredoxin family protein.
  
    0.459
Taci_0047
Conserved hypothetical protein; KEGG: dds:Ddes_0036 nucleoside recognition domain protein.
  
     0.405
Taci_1443
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dps:DP0493 DctP (periplasmic C4-dicarboxylate binding protein).
  
     0.401
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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