STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0221PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: afw:Anae109_3468 DEAD/DEAH box helicase domain-containing protein. (548 aa)    
Predicted Functional Partners:
Taci_0220
PFAM: GCN5-related N-acetyltransferase; KEGG: bcz:BCZK1679 acetyltransferase.
 
     0.799
Taci_0219
PFAM: protein of unknown function DUF342; KEGG: azo:azo1270 hypothetical protein.
       0.693
Taci_0657
PFAM: O-antigen polymerase; KEGG: bvi:Bcep1808_2756 O-antigen polymerase.
  
     0.667
Taci_0218
PFAM: ketose-bisphosphate aldolase class-II; KEGG: gbm:Gbem_1007 fructose/tagatose bisphosphate aldolase-like protein.
 
     0.613
Taci_0934
PFAM: phosphatidate cytidylyltransferase; KEGG: mxa:MXAN_2556 putative phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
     0.478
Taci_1043
PFAM: type II and III secretion system protein; NolW domain protein; KEGG: sfu:Sfum_0540 type IV pilus secretin PilQ; Belongs to the bacterial secretin family.
  
     0.474
Taci_0204
PFAM: AMP-dependent synthetase and ligase; KEGG: hha:Hhal_2209 AMP-dependent synthetase and ligase.
  
     0.464
Taci_1245
PFAM: OstA family protein; KEGG: gbm:Gbem_3347 organic solvent tolerance protein.
  
     0.430
Taci_1277
PFAM: protein of unknown function DUF1022; KEGG: mch:Mchl_1220 protein of unknown function DUF1022.
  
     0.429
Taci_0132
Hypothetical protein; KEGG: sat:SYN_01565 lipid-A-disaccharide synthase.
  
     0.421
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.