STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0262PFAM: Peptidoglycan-binding LysM; Tetratricopeptide TPR_2 repeat protein; SMART: Peptidoglycan-binding LysM; KEGG: rpi:Rpic_2267 peptidoglycan-binding LysM. (318 aa)    
Predicted Functional Partners:
Taci_0115
SMART: Tetratricopeptide domain protein; KEGG: noc:Noc_0511 TPR repeat-containing protein.
 
    0.778
Taci_0261
Hypothetical protein.
       0.773
Taci_0263
Hypothetical protein.
       0.773
Taci_1047
KEGG: ade:Adeh_0641 type IV pilus assembly protein PilM.
  
 
   0.760
Taci_0504
KEGG: oca:OCAR_5226 hypothetical protein.
  
     0.759
Taci_0807
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
     0.752
Taci_0602
Hypothetical protein; KEGG: scl:sce4867 cellulase; Belongs to the glycosyl hydrolase 26 family.
  
     0.744
Taci_1048
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; KEGG: dac:Daci_2885 fimbrial assembly protein.
  
     0.741
Taci_0316
Putative diguanylate cyclase; KEGG: hch:HCH_03148 response regulator.
  
     0.723
Taci_1377
KEGG: sfu:Sfum_2486 hypothetical protein.
  
   
 0.709
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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