Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Taci_0277PFAM: polysaccharide deacetylase; KEGG: gme:Gmet_0882 polysaccharide deacetylase. (298 aa)    
Predicted Functional Partners:
Taci_0280
PFAM: glycosyl transferase family 2; KEGG: gme:Gmet_0885 glycosyl transferase family protein.
 
 
 0.991
Taci_0278
PFAM: NAD-dependent epimerase/dehydratase; KEGG: gbm:Gbem_2983 NAD-dependent epimerase/dehydratase.
 
  
 0.957
Taci_0282
PFAM: glycosyl transferase family 39; KEGG: gme:Gmet_0887 glycosyl transferase family protein.
  
 0.945
Taci_0279
PFAM: formyl transferase domain protein; KEGG: gme:Gmet_0884 hypothetical protein.
 
  
 0.930
Taci_1280
Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
  0.821
Taci_0276
Nucleotide sugar dehydrogenase; KEGG: hha:Hhal_2178 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase.
  
  
 0.703
Taci_0281
Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: glo:Glov_3272 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.687
Taci_0435
PFAM: protein of unknown function DUF502; KEGG: wsu:WS0356 hypothetical protein.
 
     0.496
Taci_1451
KEGG: mgm:Mmc1_2383 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; Hpt domain protein; PAC repeat-containing protein; PAS domain containing protein.
     
 0.406
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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