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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0307Hypothetical protein; KEGG: sil:SPO2801 lipopolysaccharide core biosynthesis mannosyltransferase. (152 aa)    
Predicted Functional Partners:
Taci_0306
PFAM: lipid A biosynthesis acyltransferase; KEGG: rce:RC1_3612 lipid A biosynthesis lauroyl acyltransferase, putative.
 
     0.862
Taci_0658
Uncharacterized protein with myosin-like protein domain; KEGG: hypothetical protein.
 
     0.788
Taci_1288
PFAM: permease YjgP/YjgQ family protein; KEGG: permease YjgP/YjgQ family protein.
 
     0.779
Taci_0132
Hypothetical protein; KEGG: sat:SYN_01565 lipid-A-disaccharide synthase.
 
     0.770
Taci_1274
PFAM: S-layer domain protein; KEGG: bat:BAS1683 N-acetylmuramoyl-L-alanine amidase.
  
     0.769
Taci_1249
Hypothetical protein; KEGG: aba:Acid345_4431 PEGA domain protein.
  
     0.765
Taci_1295
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: gme:Gmet_2357 surface antigen (D15).
  
     0.749
Taci_0682
PFAM: outer membrane chaperone Skp (OmpH); KEGG: rce:RC1_1199 outer membrane protein OmpH precursor.
  
     0.711
Taci_0814
KEGG: aba:Acid345_3562 hypothetical protein.
  
     0.676
Taci_0893
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: hypothetical protein.
  
     0.661
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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