STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0329PFAM: Ppx/GppA phosphatase; KEGG: acp:A2cp1_0693 Ppx/GppA phosphatase. (303 aa)    
Predicted Functional Partners:
Taci_1573
PFAM: Ppx/GppA phosphatase; KEGG: gme:Gmet_0880 Ppx/GppA phosphatase.
  
  
 
0.925
Taci_1213
(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
 0.912
aroK
Shikimate kinase., 3-dehydroquinate synthase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
 
    0.872
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.852
Taci_0330
PFAM: Na+/Picotransporter; KEGG: rme:Rmet_1777 Na/Pi cotransporter II-related.
       0.785
cutC
CutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
       0.773
Taci_0332
PFAM: phosphotransferase system lactose/cellobiose- specific IIB subunit; KEGG: bat:BAS5064 PTS system, cellobiose-specific IIB component.
       0.773
Taci_0328
Hypothetical protein.
       0.556
Taci_1574
PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: gme:Gmet_0880 Ppx/GppA phosphatase.
 
     0.538
Taci_0327
Hypothetical protein.
       0.482
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.