STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutCCutC family protein; Participates in the control of copper homeostasis. Belongs to the CutC family. (225 aa)    
Predicted Functional Partners:
Taci_0332
PFAM: phosphotransferase system lactose/cellobiose- specific IIB subunit; KEGG: bat:BAS5064 PTS system, cellobiose-specific IIB component.
 
    0.894
Taci_0329
PFAM: Ppx/GppA phosphatase; KEGG: acp:A2cp1_0693 Ppx/GppA phosphatase.
       0.773
Taci_0330
PFAM: Na+/Picotransporter; KEGG: rme:Rmet_1777 Na/Pi cotransporter II-related.
       0.773
Taci_1459
TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar- specific permease EIIA 1 domain; phosphotransferase system PTS EIIB protein; KEGG: bha:BH0844 PTS system, glucose-specific enzyme II, A component.
  
  
 0.687
Taci_0328
Hypothetical protein.
       0.551
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.547
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
 
   
 0.518
Taci_0327
Hypothetical protein.
       0.482
Taci_0326
PFAM: peptidase M19 renal dipeptidase; KEGG: sil:SPO1542 renal dipeptidase family protein.
 
   
 0.440
Taci_0460
PFAM: proline racemase; KEGG: bce:BC2835 proline racemase; Belongs to the proline racemase family.
  
     0.406
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.