STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0335Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gur:Gura_4161 GntR family transcriptional regulator. (232 aa)    
Predicted Functional Partners:
Taci_0595
PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: yen:YE2648 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A synthase.
      0.825
Taci_0336
PFAM: conserved hypothetical protein; KEGG: maq:Maqu_2897 hypothetical protein.
       0.580
Taci_0334
PFAM: protein-L-isoaspartate(D-aspartate) O- methyltransferase; KEGG: azo:azo1088 protein-L-isoaspartate (D- aspartate) O-methyltransferase.
       0.476
Taci_1430
PFAM: GntR domain protein; Ribonuclease R winged- helix domain protein; KEGG: dac:Daci_2815 GntR domain-containing protein.
  
  
 0.460
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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