STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0337Hypothetical protein; KEGG: mms:mma_1292 small permease component of tripartite tricarboxylate transporter. (149 aa)    
Predicted Functional Partners:
Taci_0338
PFAM: protein of unknown function DUF112 transmembrane; KEGG: mms:mma_1293 tricarboxylate transport protein TctA.
       0.760
Taci_0336
PFAM: conserved hypothetical protein; KEGG: maq:Maqu_2897 hypothetical protein.
       0.624
Taci_0341
KEGG: ppd:Ppro_1084 citrate lyase, alpha subunit; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit.
       0.531
Taci_0339
KEGG: rfr:Rfer_2409 citrate lyase subunit gamma.
       0.530
Taci_0340
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: gbm:Gbem_3859 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
       0.530
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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