STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0367PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: pyridoxamine 5'-phosphate oxidase-related FMN- binding. (136 aa)    
Predicted Functional Partners:
Taci_0262
PFAM: Peptidoglycan-binding LysM; Tetratricopeptide TPR_2 repeat protein; SMART: Peptidoglycan-binding LysM; KEGG: rpi:Rpic_2267 peptidoglycan-binding LysM.
  
     0.591
Taci_0366
PFAM: sulfatase; KEGG: afw:Anae109_1028 sulfatase.
       0.544
Taci_0115
SMART: Tetratricopeptide domain protein; KEGG: noc:Noc_0511 TPR repeat-containing protein.
  
     0.502
Taci_0370
PFAM: glycosyl transferase family 2; KEGG: bcy:Bcer98_1099 glycosyl transferase family protein.
  
     0.461
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.