STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0395PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: pca:Pcar_0749 hypothetical protein. (107 aa)    
Predicted Functional Partners:
Taci_0392
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pca:Pcar_1585 MinD family ATPase.
 
  
 0.784
Taci_0391
PFAM: Cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dds:Ddes_1865 cobyrinic acid ac-diamide synthase.
 
  
 0.779
Taci_0394
Polysaccharide export protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.682
Taci_1616
KEGG: dol:Dole_0215 hypothetical protein.
 
     0.616
Taci_0393
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dde:Dde_3202 hypothetical protein.
 
     0.590
Taci_0397
KEGG: pca:Pcar_1967 hypothetical protein.
 
     0.590
Taci_1436
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sus:Acid_6996 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
     
 0.549
Taci_0396
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: dvm:DvMF_1364 ferric uptake regulator, Fur family; Belongs to the Fur family.
       0.541
Taci_0688
PFAM: Na+/solute symporter; KEGG: ppd:Ppro_1337 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.411
Taci_0400
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: cco:CCC13826_1743 nitrogenase cofactor biosynthesis protein NifB.
  
  
 0.400
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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