Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Taci_0396Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: dvm:DvMF_1364 ferric uptake regulator, Fur family; Belongs to the Fur family. (175 aa)    
Predicted Functional Partners:
Taci_0397
KEGG: pca:Pcar_1967 hypothetical protein.
       0.773
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.714
Taci_0107
PFAM: FeoA family protein; iron dependent repressor; SMART: iron dependent repressor; KEGG: dal:Dalk_2732 iron (metal) dependent repressor, DtxR family.
  
  
 0.581
Taci_0395
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: pca:Pcar_0749 hypothetical protein.
       0.539
Taci_0399
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0180 alkyl sulfate ester ABC transporter AstC, ATP-binding protein.
     
 0.521
Taci_0398
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cco:CCC13826_1746 putative molybdenum ABC transporter, solute-binding protein.
     
 0.514
Taci_0400
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: cco:CCC13826_1743 nitrogenase cofactor biosynthesis protein NifB.
       0.512
Taci_1480
KEGG: rru:Rru_A2872 L-2-amino-thiazoline-4- carboxylic acid hydrolase.
  
    0.503
Taci_0607
KEGG: pmr:PMI0791 CoA-binding protein.
  
    0.493
Taci_1687
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2734 ABC transporter related.
  
  
 0.463
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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