STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0399PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0180 alkyl sulfate ester ABC transporter AstC, ATP-binding protein. (249 aa)    
Predicted Functional Partners:
Taci_0398
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cco:CCC13826_1746 putative molybdenum ABC transporter, solute-binding protein.
 
 0.999
Taci_0400
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: cco:CCC13826_1743 nitrogenase cofactor biosynthesis protein NifB.
 
 
 0.998
Taci_1236
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU1888 ABC transporter, ATP-binding protein.
 
    
0.907
Taci_1426
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVU0715 branched-chain amino acid ABC transporter, ATP binding protein.
    
0.883
Taci_1152
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0165 ABC transporter ATP-binding protein.
 
    
0.863
Taci_1602
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pca:Pcar_0230 molybdate porter.
   
 0.838
Taci_0683
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpt:Bpet2650 putative branched-chain amino acid ABC transporter, ATP-binding protein.
 
    
0.549
Taci_0396
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: dvm:DvMF_1364 ferric uptake regulator, Fur family; Belongs to the Fur family.
     
 0.523
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.516
Taci_0397
KEGG: pca:Pcar_1967 hypothetical protein.
       0.512
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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