STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0423TIGRFAM: selenate reductase YgfK; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ecp:ECP_2872 putative selenate reductase subunit YgfK. (1075 aa)    
Predicted Functional Partners:
Taci_1110
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dal:Dalk_4359 oxidoreductase FAD/NAD(P)- binding domain protein.
 
 0.995
Taci_1090
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dde:Dde_0057 dihydroorotate oxidase B, electron transfer subunit.
  
 
 0.984
Taci_0424
TIGRFAM: M20/DapE family protein YgeY; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: aha:AHA_2163 peptidase.
 
 
 0.951
Taci_0422
TIGRFAM: selenium metabolism protein SsnA; PFAM: amidohydrolase; KEGG: Amidohydrolase family protein.
 
  
 0.939
Taci_0430
TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; KEGG: scl:sce6399 dihydropyrimidinase.
 
 
 0.936
Taci_0823
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: dds:Ddes_0114 thioredoxin reductase.
  
 
0.928
Taci_0421
TIGRFAM: diaminopropionate ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dde:Dde_1266 diaminopropionate ammonia-lyase.
 
  
 0.915
Taci_0431
TIGRFAM: selenium-dependent molybdenum hydroxylase 1; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: mag:amb1483 aldehyde oxidoreductase.
 
   
 0.911
pheT
KEGG: psa:PST_2364 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.896
Taci_1504
TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; RimK domain protein ATP-grasp; phosphoribosylglycinamide synthetase; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; protein of unknown function DUF201; KEGG: bha:BH2536 carbamoyl phosphate synthase large subunit; Belongs to the CarB family.
  
 
 0.896
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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