STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0432PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: scl:sce5895 putative xanthine dehydrogenase. (753 aa)    
Predicted Functional Partners:
Taci_0433
PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe- 2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; ferredoxin; KEGG: sit:TM1040_2704 molybdopterin dehydrogenase, FAD-binding.
     0.994
Taci_0415
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: smd:Smed_4005 molybdopterin dehydrogenase FAD- binding.
 
 0.993
Taci_0194
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: dps:DP2532 aerobic-type carbon monoxide dehydrogenase, small subunit.
 
 0.991
Taci_0416
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: rce:RC1_1076 carbon monoxide dehydrogenase small chain.
 
 0.991
Taci_0193
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: shl:Shal_0653 molybdopterin dehydrogenase FAD- binding.
 
 0.940
Taci_0431
TIGRFAM: selenium-dependent molybdenum hydroxylase 1; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: mag:amb1483 aldehyde oxidoreductase.
 
 
0.886
Taci_1381
PFAM: protein of unknown function DUF182; KEGG: sus:Acid_5850 hypothetical protein.
 
  
 0.812
Taci_0430
TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; KEGG: scl:sce6399 dihydropyrimidinase.
 
   
 0.658
Taci_1380
KEGG: gur:Gura_1006 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
 
   
 0.640
Taci_0746
PFAM: aminotransferase class I and II; KEGG: gur:Gura_2501 aminotransferase, class I and II.
 
      0.554
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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