STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0447Citrate synthase-like protein; KEGG: sus:Acid_3102 citrate synthase. (240 aa)    
Predicted Functional Partners:
Taci_0020
TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein; KEGG: afr:AFE_0423 aconitate hydratase, putative.
  
 0.992
Taci_0021
KEGG: sfu:Sfum_3896 isocitrate dehydrogenase, NADP- dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase.
 
 0.963
Taci_1368
PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: aba:Acid345_2964 3-isopropylmalate dehydrogenase.
 
 0.892
Taci_1612
PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: dol:Dole_2219 3-isopropylmalate dehydrogenase.
  
 0.869
Taci_0074
TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: Aldehyde Dehydrogenase; KEGG: kpe:KPK_4880 acetaldehyde dehydrogenase (acetylating).
  
 0.809
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
  
 0.795
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 0.789
clpP
ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
 0.783
Taci_0411
PFAM: FdrA family protein; KEGG: ecp:ECP_4036 YahF/FdrA-like protein.
  
 
 0.779
Taci_0413
PFAM: protein of unknown function DUF1116; KEGG: ecp:ECP_4035 hypothetical protein.
  
 
 0.779
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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