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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0447Citrate synthase-like protein; KEGG: sus:Acid_3102 citrate synthase. (240 aa)    
Predicted Functional Partners:
Taci_0021
KEGG: sfu:Sfum_3896 isocitrate dehydrogenase, NADP- dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase.
 
 
 0.948
Taci_0020
TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein; KEGG: afr:AFE_0423 aconitate hydratase, putative.
  
 0.947
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
  
 0.809
Taci_0446
Hypothetical protein.
       0.773
Taci_0450
PFAM: aminotransferase class-III; KEGG: bce:BC4127 acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.757
Taci_0449
PFAM: aspartate/glutamate/uridylate kinase; KEGG: predicted protein; K00930 acetylglutamate kinase.
  
  
 0.726
Taci_0451
TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase; PFAM: peptidase M20; KEGG: rsh:Rsph17029_3430 peptidase M20.
  
    0.690
Taci_0074
TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: Aldehyde Dehydrogenase; KEGG: kpe:KPK_4880 acetaldehyde dehydrogenase (acetylating).
  
 
 0.659
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
  
 0.647
Taci_1368
PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: aba:Acid345_2964 3-isopropylmalate dehydrogenase.
 
 0.641
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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