STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0484PFAM: polysaccharide pyruvyl transferase; KEGG: bat:BAS0840 CsaB protein. (336 aa)    
Predicted Functional Partners:
Taci_0483
Hypothetical protein.
 
  
 0.956
Taci_0489
PFAM: Peptidase M23; KEGG: gsu:GSU1773 M23/M37 peptidase domain- containing protein.
 
     0.917
Taci_0488
PFAM: protein of unknown function DUF214; KEGG: acp:A2cp1_0702 protein of unknown function DUF214; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
     0.896
Taci_0487
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU35260 cell-division ATP-binding protein.
 
  
 0.859
uppP
Bacitracin resistance protein BacA; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
 
    0.856
Taci_0482
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
     0.847
Taci_0485
PFAM: Transketolase domain protein; KEGG: gsu:GSU2919 transketolase, N-terminal subunit.
       0.825
Taci_0486
PFAM: Transketolase domain protein; Transketolase central region; KEGG: pca:Pcar_2719 transketolase, C-terminal subunit.
       0.825
Taci_0481
Hypothetical protein.
       0.811
Taci_1005
KEGG: ank:AnaeK_2861 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
 
   
 0.787
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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