STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0491PFAM: protein of unknown function DUF610 YibQ; KEGG: ppd:Ppro_2408 protein of unknown function DUF610, YibQ. (325 aa)    
Predicted Functional Partners:
Taci_0490
KEGG: carboxyl-terminal protease; K03797 carboxyl-terminal processing protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family.
       0.825
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.823
Taci_0493
PFAM: GCN5-related N-acetyltransferase; KEGG: tbd:Tbd_1724 SSU ribosomal protein S18P alanine acetyltransferase.
       0.774
Taci_0489
PFAM: Peptidase M23; KEGG: gsu:GSU1773 M23/M37 peptidase domain- containing protein.
     
 0.768
Taci_0487
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU35260 cell-division ATP-binding protein.
       0.715
Taci_0488
PFAM: protein of unknown function DUF214; KEGG: acp:A2cp1_0702 protein of unknown function DUF214; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.715
Taci_0482
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.710
Taci_0483
Hypothetical protein.
       0.710
Taci_0484
PFAM: polysaccharide pyruvyl transferase; KEGG: bat:BAS0840 CsaB protein.
       0.710
Taci_0486
PFAM: Transketolase domain protein; Transketolase central region; KEGG: pca:Pcar_2719 transketolase, C-terminal subunit.
       0.704
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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