STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0529TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Miro domain protein; Ferrous iron transport B domain protein; KEGG: gme:Gmet_2444 ferrous iron transport protein B. (587 aa)    
Predicted Functional Partners:
Taci_0530
PFAM: FeoA family protein; KEGG: ank:AnaeK_3366 FeoA family protein.
  
  
 0.910
Taci_0109
PFAM: FeoA family protein; KEGG: rsq:Rsph17025_3854 Fe2+ transport system protein B-like protein.
 
  
 0.776
Taci_0528
PFAM: tRNA pseudouridine synthase D TruD; KEGG: afw:Anae109_1378 tRNA pseudouridine synthase D TruD.
       0.773
Taci_0107
PFAM: FeoA family protein; iron dependent repressor; SMART: iron dependent repressor; KEGG: dal:Dalk_2732 iron (metal) dependent repressor, DtxR family.
  
  
 0.664
Taci_0531
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bha:BH2444 two-component response regulator involved in modulation of flagellar.
       0.542
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.