STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0574KEGG: gbe:GbCGDNIH1_0877 Gln/Arg/Lys/His-binding protein and permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: extracellular solute-binding protein family 3; binding-protein-dependent transport systems inner membrane component; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor. (510 aa)    
Predicted Functional Partners:
Taci_0575
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gbe:GbCGDNIH1_0876 Gln/Arg/Lys/His transport ATP-binding protein.
 
 0.999
Taci_1322
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bsu:BSU16320 flagellar motor switch protein.
    
 
 0.893
Taci_1309
CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; KEGG: bha:BH2434 inhibition of CheR-mediated methylation of MCPs.
    
   0.866
Taci_0576
PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pmy:Pmen_0801 ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.812
argG
KEGG: bha:BH3187 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; ExsB family protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.812
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: argininosuccinate lyase; K01755 argininosuccinate lyase.
  
  
 0.747
Taci_0133
PFAM: extracellular solute-binding protein family 3; chemotaxis sensory transducer; SMART: extracellular solute-binding protein family 3; chemotaxis sensory transducer; KEGG: gsu:GSU1300 methyl-accepting chemotaxis protein.
 
 
 0.672
Taci_1474
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vpa:VPA0350 putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.669
Taci_1236
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU1888 ABC transporter, ATP-binding protein.
 
   
 0.668
pstB
Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
    
 0.659
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.