STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
buk-3TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase; KEGG: bce:BC4161 butyrate kinase; Belongs to the acetokinase family. (362 aa)    
Predicted Functional Partners:
Taci_0376
PFAM: phosphate acetyl/butaryl transferase; KEGG: bcy:Bcer98_2860 phosphate butyryltransferase.
 
 0.985
Taci_0453
KEGG: bcb:BCB4264_A4276 phosphate butyryltransferase; TIGRFAM: phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase.
 
 0.982
Taci_0592
Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: bpt:Bpet4860 putative aminotransferase.
       0.775
buk-2
TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase; KEGG: bat:BAS4069 butyrate kinase; Belongs to the acetokinase family.
 
    
0.719
Taci_0589
KEGG: dal:Dalk_2229 putative ATP/GTP-binding protein.
       0.688
Taci_0588
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: 4Fe-4S ferredoxin iron-sulfur binding domain protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta.
       0.626
Taci_0587
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: dal:Dalk_2231 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
     
 0.537
Taci_0586
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sfu:Sfum_0300 thiamine pyrophosphate enzyme domain protein TPP-binding.
     
 0.536
Taci_0585
TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: dvm:DvMF_2057 pyruvate ferredoxin/flavodoxin oxidoreductase.
     
 0.535
Taci_0188
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: mms:mma_0278 glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.480
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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