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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0598PFAM: protein of unknown function DUF1121; KEGG: dal:Dalk_2774 protein of unknown function DUF1121. (214 aa)    
Predicted Functional Partners:
Taci_1436
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sus:Acid_6996 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
  
 0.802
Taci_0597
PFAM: Asparaginase/glutaminase; KEGG: scl:sce3372 L-asparaginase.
       0.660
Taci_0599
PFAM: acylphosphatase; KEGG: nha:Nham_2164 acylphosphatase.
       0.568
Taci_0600
PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: afw:Anae109_4370 threonyl/alanyl tRNA synthetase SAD.
       0.516
Taci_0601
PFAM: SNARE associated Golgi protein; KEGG: tbd:Tbd_2081 putative integral membrane protein DedA-like protein.
       0.516
Taci_0602
Hypothetical protein; KEGG: scl:sce4867 cellulase; Belongs to the glycosyl hydrolase 26 family.
       0.516
Taci_0967
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_2714 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
     0.487
Taci_0688
PFAM: Na+/solute symporter; KEGG: ppd:Ppro_1337 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
    0.461
Taci_1090
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dde:Dde_0057 dihydroorotate oxidase B, electron transfer subunit.
  
   0.439
Taci_1110
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dal:Dalk_4359 oxidoreductase FAD/NAD(P)- binding domain protein.
  
   0.439
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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