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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (675 aa)    
Predicted Functional Partners:
hutH
KEGG: sfu:Sfum_2378 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
 
 0.998
hutI
KEGG: sfu:Sfum_2377 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3.
 
 0.996
Taci_0191
PFAM: phenylalanine/histidine ammonia-lyase; KEGG: bur:Bcep18194_B3018 phenylalanine/histidine ammonia-lyase.
 
 0.994
Taci_0442
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bha:BH3008 hypothetical protein.
  
  
 0.824
Taci_0915
KEGG: sus:Acid_5208 glutamate formiminotransferase; TIGRFAM: glutamate formiminotransferase; PFAM: Formiminotransferase domain protein; Formiminotransferase domain protein.
 
    0.558
Taci_0232
PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bba:Bd1812 formimidoylglutamase; Belongs to the arginase family.
  
  
 0.534
Taci_0605
Hypothetical protein.
       0.508
Taci_0603
TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; KEGG: eba:ebA6376 GTP-binding protein.
       0.500
Taci_0233
Transcriptional regulator, SARP family; SMART: AAA ATPase; KEGG: pol:Bpro_1406 transcriptional activator domain.
 
     0.407
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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