STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0607KEGG: pmr:PMI0791 CoA-binding protein. (136 aa)    
Predicted Functional Partners:
Taci_0608
PFAM: thioesterase superfamily protein; KEGG: sus:Acid_5912 thioesterase superfamily protein.
     
 0.804
Taci_0609
Hypothetical protein.
       0.750
Taci_0610
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: tgr:Tgr7_2514 heavy metal translocating P- type ATPase.
       0.656
Taci_0611
PFAM: Heavy metal transport/detoxification protein; KEGG: mfa:Mfla_1081 heavy metal transport/detoxification protein.
       0.611
Taci_0606
Hypothetical protein.
       0.584
Taci_0612
Hypothetical protein.
       0.482
Taci_0396
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: dvm:DvMF_1364 ferric uptake regulator, Fur family; Belongs to the Fur family.
  
    0.473
Taci_0844
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sat:SYN_02524 ferric uptake regulator family protein; Belongs to the Fur family.
  
    0.473
Taci_1604
KEGG: rso:RSc0048 putative transcription regulator protein; Belongs to the Fur family.
  
    0.473
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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