Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Taci_0629PFAM: histidine triad (HIT) protein; KEGG: scl:sce9030 putative protein kinase C inhibitor. (112 aa)    
Predicted Functional Partners:
rpsU
TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: bsu:BSU25410 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
    0.742
Taci_1361
SMART: AAA ATPase; KEGG: afw:Anae109_3852 cyclic nucleotide-binding protein.
   
  0.741
Taci_1547
Glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: acp:A2cp1_4408 glutamine synthetase, type I.
  
   0.729
Taci_0631
KEGG: nis:NIS_0988 GatB/YqeY domain-containing protein.
     
 0.726
Taci_0901
KEGG: mag:amb2900 rRNA methylase; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein.
      0.712
Taci_0362
PFAM: Silent information regulator protein Sir2; KEGG: pca:Pcar_0631 Sir2 family NAD-dependent protein deacetylase.
  
 
  0.706
Taci_0628
PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: hypothetical protein.
   
   0.686
Taci_0627
PFAM: Heat shock protein 70; KEGG: bcr:BCAH187_A4447 chaperone protein DnaK.
     
 0.672
Taci_0626
RNA modification enzyme, MiaB family; KEGG: gme:Gmet_0874 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB.
  
   0.671
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bha:BH0098 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.648
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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