rpsU protein (Thermanaerovibrio acidaminovorans)

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rpsU

TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: bsu:BSU25410 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (60 aa)

Predicted Functional Partners:

rpsT

0.989

rpmB

0.988

rpsP

0.988

rplU

0.987

rplM

0.986

rpsO

0.985

Taci_0631

0.982

rpmI

0.982

rpsB

0.982

rpmA

0.982

Your Current Organism:

Thermanaerovibrio acidaminovorans

NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Taci_0631	rplU	Taci_0631	Taci_0898	KEGG: nis:NIS_0988 GatB/YqeY domain-containing protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.406
Taci_0631	rpsO	Taci_0631	Taci_0718	KEGG: nis:NIS_0988 GatB/YqeY domain-containing protein.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.681
Taci_0631	rpsU	Taci_0631	Taci_0630	KEGG: nis:NIS_0988 GatB/YqeY domain-containing protein.	TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: bsu:BSU25410 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.982
rplM	rplU	Taci_1528	Taci_0898	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
rplM	rpmA	Taci_1528	Taci_0896	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: fta:FTA_1539 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.990
rplM	rpmB	Taci_1528	Taci_0905	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: dps:DP1683 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.988
rplM	rpmI	Taci_1528	Taci_0725	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: dvm:DvMF_0982 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.989
rplM	rpsB	Taci_1528	Taci_0742	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: bha:BH2427 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.991
rplM	rpsO	Taci_1528	Taci_0718	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.991
rplM	rpsP	Taci_1528	Taci_1417	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: bcb:BCB4264_A3943 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.989
rplM	rpsT	Taci_1528	Taci_0700	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.990
rplM	rpsU	Taci_1528	Taci_0630	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: bsu:BSU25410 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.986
rplU	Taci_0631	Taci_0898	Taci_0631	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	KEGG: nis:NIS_0988 GatB/YqeY domain-containing protein.	0.406
rplU	rplM	Taci_0898	Taci_1528	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.990
rplU	rpmA	Taci_0898	Taci_0896	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: fta:FTA_1539 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplU	rpmB	Taci_0898	Taci_0905	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: dps:DP1683 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.993
rplU	rpmI	Taci_0898	Taci_0725	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: dvm:DvMF_0982 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.987
rplU	rpsB	Taci_0898	Taci_0742	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: bha:BH2427 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.989
rplU	rpsO	Taci_0898	Taci_0718	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.986
rplU	rpsP	Taci_0898	Taci_1417	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: bcb:BCB4264_A3943 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.989

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