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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0634TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: pca:Pcar_2732 pyruvate-formate lyase- activating enzyme. (227 aa)    
Predicted Functional Partners:
Taci_0633
TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: sat:SYN_01979 anaerobic ribonucleoside- triphosphate reductase.
  
 0.974
nrdR
ATP-cone domain protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
       0.813
Taci_1437
PFAM: pyruvate formate-lyase PFL; formate C- acetyltransferase glycine radical; KEGG: dps:DP0616 formate C-acetyltransferase.
  
  
 0.752
Taci_0635
PFAM: Extracellular ligand-binding receptor; KEGG: dds:Ddes_1065 extracellular ligand-binding receptor.
       0.470
rpsU
TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: bsu:BSU25410 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
       0.441
Taci_0631
KEGG: nis:NIS_0988 GatB/YqeY domain-containing protein.
       0.435
Taci_1436
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sus:Acid_6996 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
     
 0.430
Taci_1279
PFAM: iron-containing alcohol dehydrogenase; KEGG: met:M446_1233 iron-containing alcohol dehydrogenase.
  
  
 0.427
Taci_1760
PFAM: iron-containing alcohol dehydrogenase; KEGG: dds:Ddes_2051 iron-containing alcohol dehydrogenase.
  
  
 0.427
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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