STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0657PFAM: O-antigen polymerase; KEGG: bvi:Bcep1808_2756 O-antigen polymerase. (588 aa)    
Predicted Functional Partners:
Taci_0656
KEGG: cbg:CbuG_0036 chromosome partitioning protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the ParB family.
       0.798
Taci_1245
PFAM: OstA family protein; KEGG: gbm:Gbem_3347 organic solvent tolerance protein.
  
   
 0.791
Taci_0047
Conserved hypothetical protein; KEGG: dds:Ddes_0036 nucleoside recognition domain protein.
  
     0.769
Taci_0183
PFAM: protein of unknown function DUF6 transmembrane; KEGG: amc:MADE_00423 predicted permease, DMT superfamily protein.
  
     0.740
Taci_0659
PFAM: GCN5-related N-acetyltransferase; KEGG: cps:CPS_2929 acetyltransferase.
 
     0.740
Taci_1277
PFAM: protein of unknown function DUF1022; KEGG: mch:Mchl_1220 protein of unknown function DUF1022.
 
     0.726
Taci_1274
PFAM: S-layer domain protein; KEGG: bat:BAS1683 N-acetylmuramoyl-L-alanine amidase.
  
     0.709
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
       0.697
Taci_0655
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.697
Taci_0653
Membrane protein-like protein; KEGG: bcb:BCB4264_A5598 hypothetical protein.
       0.696
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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