STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0659PFAM: GCN5-related N-acetyltransferase; KEGG: cps:CPS_2929 acetyltransferase. (141 aa)    
Predicted Functional Partners:
Taci_0658
Uncharacterized protein with myosin-like protein domain; KEGG: hypothetical protein.
 
     0.786
Taci_0657
PFAM: O-antigen polymerase; KEGG: bvi:Bcep1808_2756 O-antigen polymerase.
 
     0.740
Taci_1245
PFAM: OstA family protein; KEGG: gbm:Gbem_3347 organic solvent tolerance protein.
  
     0.673
Taci_1274
PFAM: S-layer domain protein; KEGG: bat:BAS1683 N-acetylmuramoyl-L-alanine amidase.
  
     0.651
Taci_0132
Hypothetical protein; KEGG: sat:SYN_01565 lipid-A-disaccharide synthase.
  
     0.640
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
   
   0.588
Taci_1226
PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: sfu:Sfum_3074 molybdopterin-guanine dinucleotide biosynthesis MobB region.
  
   
 0.565
Taci_0682
PFAM: outer membrane chaperone Skp (OmpH); KEGG: rce:RC1_1199 outer membrane protein OmpH precursor.
  
     0.534
Taci_0307
Hypothetical protein; KEGG: sil:SPO2801 lipopolysaccharide core biosynthesis mannosyltransferase.
 
     0.526
Taci_0661
KEGG: ank:AnaeK_0247 phosphoribosyltransferase.
       0.525
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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