Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Taci_0669PFAM: protein of unknown function DUF115; KEGG: cjd:JJD26997_0373 motility accessory factor. (891 aa)    
Predicted Functional Partners:
Taci_0666
PFAM: flagellin domain protein; KEGG: psa:PST_1398 flagellar hook-associated protein FlgL.
 
 
 0.958
Taci_0665
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: bha:BH3621 flagellar hook-associated protein FlgK.
 
     0.940
Taci_0670
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.884
fliW
Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
     0.814
Taci_0645
Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein; KEGG: dal:Dalk_0630 glycosyltransferase 28 domain protein.
 
   
 0.792
csrA
Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
       0.790
Taci_0807
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
     0.783
Taci_1676
PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: dps:DP0218 cobyrinic acid A,C-diamide synthase (CobB).
  
     0.766
Taci_0663
PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: dds:Ddes_2005 anti-sigma-28 factor, FlgM.
       0.744
Taci_1335
PFAM: flagellar assembly protein FliH; KEGG: bha:BH2456 flagellar assembly protein H.
 
     0.741
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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