STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0680PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: pca:Pcar_1141 pyridoxal-phosphate-dependent aminotransferase enzyme; Belongs to the DegT/DnrJ/EryC1 family. (374 aa)    
Predicted Functional Partners:
Taci_0679
PFAM: polysaccharide biosynthesis protein CapD; 3- beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KR domain protein; dTDP-4- dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: mmw:Mmwyl1_3560 polysaccharide biosynthesis protein CapD.
  
 0.954
Taci_0677
PFAM: acylneuraminate cytidylyltransferase; KEGG: dal:Dalk_0629 aminotransferase class-III.
 
  
 0.875
Taci_0947
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gme:Gmet_2352 oxidoreductase-like.
  
 0.784
Taci_0039
PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: ppd:Ppro_3385 polysaccharide biosynthesis protein CapD.
 
  
 0.769
Taci_0678
PFAM: aminotransferase class-III; KEGG: nwi:Nwi_2388 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.736
Taci_0645
Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein; KEGG: dal:Dalk_0630 glycosyltransferase 28 domain protein.
 
  
 0.710
Taci_1618
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short- chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: swi:Swit_4019 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.710
Taci_0038
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: tmz:Tmz1t_1126 sugar transferase.
 
  
 0.616
Taci_0643
PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: dal:Dalk_0632 N-acetylneuraminate synthase.
 
  
 0.571
Taci_0673
KEGG: dal:Dalk_0633 LPS biosynthesis protein.
 
    0.569
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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