STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0687PFAM: protein of unknown function DUF355; KEGG: dal:Dalk_1099 protein of unknown function DUF355. (164 aa)    
Predicted Functional Partners:
Taci_0686
PFAM: inner-membrane translocator; KEGG: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.500
Taci_0683
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpt:Bpet2650 putative branched-chain amino acid ABC transporter, ATP-binding protein.
       0.497
Taci_0684
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvm:DvMF_1163 ABC transporter related.
       0.497
Taci_0685
PFAM: inner-membrane translocator; KEGG: gbm:Gbem_1944 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.497
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.