rpsT protein (Thermanaerovibrio acidaminovorans)

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rpsT

Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (92 aa)

Predicted Functional Partners:

rpmB

0.990

rplM

0.990

rpsU

0.989

rpmH

0.989

rpsO

0.989

rpmE

0.989

rplU

0.989

rpmF

0.989

rpsI

0.989

rpsP

0.987

Your Current Organism:

Thermanaerovibrio acidaminovorans

NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	Taci_1528	Taci_0898	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
rplM	rpmB	Taci_1528	Taci_0905	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: dps:DP1683 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.988
rplM	rpmE	Taci_1528	Taci_0818	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L31; Binds the 23S rRNA.	0.975
rplM	rpmF	Taci_1528	Taci_1103	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: mgm:Mmc1_1643 LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.987
rplM	rpmH	Taci_1528	Taci_0702	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: abu:Abu_1625 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.979
rplM	rpsI	Taci_1528	Taci_1527	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S9; KEGG: mxa:MXAN_1994 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.998
rplM	rpsO	Taci_1528	Taci_0718	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.991
rplM	rpsP	Taci_1528	Taci_1417	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: bcb:BCB4264_A3943 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.989
rplM	rpsT	Taci_1528	Taci_0700	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.990
rplM	rpsU	Taci_1528	Taci_0630	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: bsu:BSU25410 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.986
rplU	rplM	Taci_0898	Taci_1528	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.990
rplU	rpmB	Taci_0898	Taci_0905	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: dps:DP1683 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.993
rplU	rpmE	Taci_0898	Taci_0818	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L31; Binds the 23S rRNA.	0.983
rplU	rpmF	Taci_0898	Taci_1103	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: mgm:Mmc1_1643 LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.990
rplU	rpmH	Taci_0898	Taci_0702	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: abu:Abu_1625 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.987
rplU	rpsI	Taci_0898	Taci_1527	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S9; KEGG: mxa:MXAN_1994 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.990
rplU	rpsO	Taci_0898	Taci_0718	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.986
rplU	rpsP	Taci_0898	Taci_1417	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: bcb:BCB4264_A3943 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.989
rplU	rpsT	Taci_0898	Taci_0700	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.989
rplU	rpsU	Taci_0898	Taci_0630	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: bsu:BSU25410 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.987

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