STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0796PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: sat:SYN_03206 ABC transporter ATP-binding protein. (252 aa)    
Predicted Functional Partners:
Taci_0797
PFAM: SufBD protein; KEGG: sat:SYN_02867 ABC transporter system permease involved in Fe-S cluster assembly.
 
 
 0.999
Taci_0250
TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: sat:SYN_01071 cysteine desulfurase / selenocysteine lyase.
 
  
 0.976
Taci_0206
TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein; KEGG: dol:Dole_0755 NifU domain-containing protein.
  
  
 0.919
Taci_1153
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcy:Bcer98_0133 cobalt transporter ATP- binding subunit.
 
    
0.788
glsA
PFAM: Glutaminase, core; KEGG: bcu:BCAH820_0480 glutaminase A; Belongs to the glutaminase family.
       0.718
Taci_0794
PFAM: phosphoglucose isomerase (PGI); KEGG: afw:Anae109_2086 glucose-6-phosphate isomerase.
     
 0.681
Taci_0793
PFAM: dihydroneopterin aldolase; KEGG: dihydroneopterin aldolase; K01633 dihydroneopterin aldolase.
       0.601
Taci_0927
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dol:Dole_3058 radical SAM domain-containing protein.
  
     0.594
Taci_0792
TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; KEGG: sfu:Sfum_3219 glutaredoxin-like protein, YruB- family.
  
  
 0.548
Taci_0399
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN0180 alkyl sulfate ester ABC transporter AstC, ATP-binding protein.
 
     0.503
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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