STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0827TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: pca:Pcar_1111 flagellar protein FliS. (154 aa)    
Predicted Functional Partners:
Taci_1322
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bsu:BSU16320 flagellar motor switch protein.
 
  
 0.999
Taci_0670
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.993
Taci_0663
PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: dds:Ddes_2005 anti-sigma-28 factor, FlgM.
  
 
 0.988
Taci_0666
PFAM: flagellin domain protein; KEGG: psa:PST_1398 flagellar hook-associated protein FlgL.
 
 
 0.987
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
 
 0.987
Taci_0357
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2710 CheA signal transduction histidine kinase.
  
  
 0.984
Taci_0665
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: bha:BH3621 flagellar hook-associated protein FlgK.
 
 
 0.984
Taci_1323
TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: bha:BH2446 flagellar motor switch protein FliM.
 
  
 0.972
Taci_1572
PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: bcy:Bcer98_1369 putative CheW protein.
  
  
 0.972
Taci_1326
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dal:Dalk_1014 MotA/TolQ/ExbB proton channel.
 
  
 0.971
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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