STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpB-2H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (472 aa)    
Predicted Functional Partners:
atpD-2
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.998
Taci_0854
PFAM: H+transporting two-sector ATPase C subunit; KEGG: hypothetical protein; K02155 V-type H+- transporting ATPase 16kDa proteolipid subunit.
 
 0.996
Taci_0856
PFAM: H+transporting two-sector ATPase C (AC39) subunit.
 
 0.996
atpA-2
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
0.996
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.994
Taci_0857
PFAM: Vacuolar H+transporting two-sector ATPase F subunit.
 
 0.994
Taci_0853
PFAM: V-type ATPase 116 kDa subunit; KEGG: afw:Anae109_2569 V-type ATPase 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.992
Taci_0855
PFAM: H+transporting two-sector ATPase E subunit; KEGG: tgr:Tgr7_2230 TonB family protein.
 
 0.992
Taci_0521
PFAM: V-type ATPase 116 kDa subunit; KEGG: noc:Noc_2087 V-type ATPase, 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.985
atpA
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
0.982
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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