STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0907PFAM: cell divisionFtsK/SpoIIIE; KEGG: bha:BH3250 DNA translocase (stage III sporulation protein SpoIIIE); Belongs to the FtsK/SpoIIIE/SftA family. (744 aa)    
Predicted Functional Partners:
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
    0.830
Taci_0906
TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: YALI0E21351p; K00949 thiamine pyrophosphokinase.
       0.825
rnj
Beta-lactamase domain protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
 
    0.751
Taci_0547
PFAM: AAA ATPase central domain protein; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: gsu:GSU2067 recombination factor protein RarA.
  
 0.745
Taci_1724
parB-like partition protein; KEGG: rru:Rru_A3628 chromosome segregation DNA- binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the ParB family.
  
  
 0.732
Taci_0656
KEGG: cbg:CbuG_0036 chromosome partitioning protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the ParB family.
  
  
 0.717
Taci_1023
PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aeh:Mlg_0063 tyrosine recombinase XerC; Belongs to the 'phage' integrase family.
 
   
 0.676
Taci_1344
PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dds:Ddes_0967 integrase family protein; Belongs to the 'phage' integrase family.
 
   
 0.657
Taci_1027
PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: sfu:Sfum_2118 ribosomal protein S1.
 
  
 0.625
Taci_1079
DNA polymerase I; KEGG: bcy:Bcer98_3272 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; Helix-hairpin-helix domain protein class 2.
 
  
 0.623
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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